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I am using Gitlab, Spring Boot and Google Cloud App Engine, Google Cloud mySql.

I have resource bundle files like application-{environment}.yaml for my Spring Boot application.

I don't want to keep the secrets in application-*.yaml files. I wanted those sensitive variables in App Engine's System Environment. But I think there is no Environment Variable support on Google Cloud App Engine.

I wanted to ask if there is a way to do this.. before I completely abandon Google Cloud Platform.

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You could use Google Cloud Secrets Manager to store and retrieve them. That way you can keep serveless, as Google handles the encryption of secrets.

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