I have multiple LDAP servers and different user groups in each. I want to authenticate using both LDAP servers which have different base DNs.
Is it possible to put in multiple bind and base DN values in ldap.conf?
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No. At best, you could split off authentication to one server and your NSS lookups for users and groups to another server.
The only way to have a "meta database" that consolidates the information of both is to actually maintain one. You must sync data from one server to the other, or set up a third server that replicates the necessary trees from the two other servers.